{ "_id": "6a51ecc19b92047c28d5294d", "Package": "posteriordb", "Type": "Package", "Title": "R Functionality for PosteriorDB", "Version": "0.3.6", "Date": "2026-01-17", "Authors@R": "c(person(\"Mans\", \"Magnusson\", email = \"mans.magnusson@statistik.uu.se\",\nrole = c(\"cre\", \"aut\")),\nperson(\"Jakob\", \"Torgander\", email = \"jakob.torgander@statistik.uu.se\",\nrole = c(\"aut\")),\nperson(\"Paul-Christian\", \"Bürkner\", email = \"paul.buerkner@gmail.com\",\nrole = c(\"aut\")),\nperson(\"Aki\", \"Vehtari\", email = \"aki.vehtari@aalto.fi\",\nrole = c(\"aut\")))", "Maintainer": "Mans Magnusson ", "Description": "R functionality of easy handling of the posteriordb\nposteriors.", "License": "BSD_3_clause + file LICENSE", "RoxygenNote": "7.3.1", "Encoding": "UTF-8", "VignetteBuilder": "knitr", "Config/pak/sysreqs": "git libssl-dev", "Repository": "https://stan-dev.r-universe.dev", "Date/Publication": "2026-03-13 16:52:22 UTC", "RemoteUrl": "https://github.com/stan-dev/posteriordb-r", "RemoteRef": "HEAD", "RemoteSha": "ad0922f46fd641d82f21930bca6013bb2e67a5c6", "NeedsCompilation": "no", "Packaged": { "Date": "2026-07-11 06:09:41 UTC", "User": "root" }, "Author": "Mans Magnusson [cre, aut],\nJakob Torgander [aut],\nPaul-Christian Bürkner [aut],\nAki Vehtari [aut]", "_user": "stan-dev", "_type": "src", "_file": "posteriordb_0.3.6.tar.gz", "_fileid": "https://r2.ropensci.org/a93c7da04a234b82f47e3b1125a503e3f9db26c0bb55876f42ad4fccf16438eb", "_filesize": 192872, "_sha256": "a93c7da04a234b82f47e3b1125a503e3f9db26c0bb55876f42ad4fccf16438eb", "_expires": "2026-10-19T07:11:59.000Z", "_created": "2026-07-11T06:09:41.000Z", "_published": "2026-07-11T07:12:00.937Z", "_jobs": [ { "job": 86517854003, "time": 190, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "ERROR", "artifact": "8245602475" }, { "job": 86517854015, "time": 185, "config": "linux-release-x86_64", "r": "4.6.1", "check": "ERROR", "artifact": "8245602015" }, { "job": 86517853991, "time": 135, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "ERROR", "artifact": "8245594227" }, { "job": 86517853990, "time": 127, "config": "macos-release-arm64", "r": "4.6.1", "check": "ERROR", "artifact": "8245593067" }, { "job": 86517583457, "time": 230, "config": "source", "r": "4.6.1", "check": "ERROR", "artifact": "8245574189" }, { "job": 86517853989, "time": 152, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "8245596730" }, { "job": 86517854004, "time": 3692, "config": "windows-devel", "r": "4.7.0", "check": "FAILURE", "artifact": "" }, { "job": 86517854012, "time": 3693, "config": "windows-oldrel", "r": "4.5.3", "check": "FAILURE", "artifact": "" }, { "job": 86517854009, "time": 3704, "config": "windows-release", "r": "4.6.1", "check": "FAILURE", "artifact": "" } ], "_host": "GitHub-Actions", "_buildurl": "https://github.com/r-universe/stan-dev/actions/runs/29142266474", "_status": "failure", "_upstream": "https://github.com/stan-dev/posteriordb-r", "_commit": { "id": "ad0922f46fd641d82f21930bca6013bb2e67a5c6", "author": "Måns Magnusson ", "committer": "GitHub ", "message": "Merge pull request #18 from stan-dev/adds_pymc_version\n\nAdds support for general framework model code tests", "time": 1773420742 }, "_maintainer": { "name": "Mans Magnusson", "email": "mans.magnusson@gmail.com" }, "_distro": "resolute", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.5.0", "role": "Depends" }, { "package": "checkmate", "role": "Imports" }, { "package": "gh", "role": "Imports" }, { "package": "jsonlite", "role": "Imports" }, { "package": "bibtex", "role": "Suggests" }, { "package": "BH", "role": "Suggests" }, { "package": "covr", "role": "Suggests" }, { "package": "digest", "role": "Suggests" }, { "package": "dplyr", "role": "Suggests" }, { "package": "dotenv", "role": "Suggests" }, { "package": "httr", "role": "Suggests" }, { "package": "git2r", "role": "Suggests" }, { "package": "posterior", "role": "Suggests" }, { "package": "remotes", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "rstan", "role": "Suggests" }, { "package": "RcppEigen", "role": "Suggests" }, { "package": "testthat", "role": "Suggests" }, { "package": "tibble", "role": "Suggests" }, { "package": "yaml", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" } ], "_owner": "stan-dev", "_selfowned": true, "_usedby": 0, "_updates": [ { "week": "2025-33", "n": 2 }, { "week": "2025-39", "n": 1 }, { "week": "2025-41", "n": 1 }, { "week": "2025-43", "n": 1 }, { "week": "2026-03", "n": 2 }, { "week": "2026-04", "n": 1 }, { "week": "2026-11", "n": 1 } ], "_tags": [ { "name": "v0.3.4", "date": "2025-08-12" }, { "name": "v0.3.5", "date": "2025-10-26" }, { "name": "v0.3.6", "date": "2026-01-17" } ], "_stars": 9, "_contributors": [ { "user": "mansmeg", "count": 135, "uuid": 2458198 }, { "user": "jtorgander", "count": 8, "uuid": 55882444 }, { "user": "andrjohns", "count": 2, "uuid": 27717896 }, { "user": "visruthsk", "count": 2, "uuid": 67435125 }, { "user": "avehtari", "count": 1, "uuid": 6705400 }, { "user": "rok-cesnovar", "count": 1, "uuid": 28476796 } ], "_userbio": { "uuid": 3374820, "type": "organization", "name": "Stan", "followers": 542 }, "_downloads": { "count": 0, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/posteriordb" }, "_devurl": "https://github.com/stan-dev/posteriordb-r", "_searchresults": 118, "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/posteriordb.html", "extra/readme.html", "extra/readme.md", "LICENSE", "manual.pdf" ], "_cranurl": false, "_exports": [ "alias_names", "as.data_info", "as.model_code", "as.model_info", "as.pdb_data", "as.pdb_data_info", "as.pdb_model_code", "as.pdb_model_info", "as.pdb_posterior", "as.pdb_reference_posterior_draws", "as.pdb_reference_posterior_info", "as.posterior", "as.reference_posterior_draws", "as.reference_posterior_info", "as.stan_code", "assert_checked_reference_posterior_draws", "assert_checked_summary_statistics_draws", "assert_reference_posterior_draws", "bibliography", "check_pdb", "check_pdb_posterior", "check_reference_posterior_draws", "check_summary_statistics_draws", "compute_reference_posterior_draws", "compute_reference_posterior_summary_statistic", "compute_summary_statistic", "data_file_path", "data_info", "data_names", "filter_posteriors", "framework", "framework<-", "get_data", "github_pat", "info", "info<-", "model_code", "model_code_file_path", "model_info", "model_names", "pdb", "pdb_bibliography", "pdb_config", "pdb_data", "pdb_data_info", "pdb_default", "pdb_github", "pdb_local", "pdb_model_code", "pdb_model_info", "pdb_posterior", "pdb_reference_posterior_draws", "pdb_reference_posterior_draws_info", "pdb_reference_posterior_info", "pdb_reference_posterior_summary_statistic", "pdb_reference_posterior_summary_statistics", "pdb_stan_code", "pdb_version", "posterior", "posterior_name", "posterior_names", "posteriors_tbl_df", "reference_posterior_draws", "reference_posterior_draws_file_path", "reference_posterior_draws_info", "reference_posterior_info", "reference_posterior_names", "reference_posterior_summary_statistic", "reference_posterior_summary_statistics", "remove_pdb", "rename_pdb", "stan_code", "stan_code_file_path", "stan_data", "stan_data_file_path", "thin_draws.pdb_reference_posterior_draws", "write_pdb" ], "_help": [ { "page": "alias_names", "title": "Get all existing alias names from a posterior database", "topics": [ "alias_names" ] }, { "page": "as.data.frame.pdb_posterior", "title": "Coerce a [pdb_posterior] to a Data Frame", "topics": [ "as.data.frame.pdb_posterior", "as.data.frame.pdb_posteriors" ] }, { "page": "reference_posterior_draws", "title": "Reference Posterior draws and summary statistics", "topics": [ "as.pdb_reference_posterior_draws", "as.reference_posterior_draws", "as.reference_posterior_draws.draws_list", "as.reference_posterior_draws.stanfit", "assert_reference_posterior_draws", "pdb_reference_posterior_draws", "reference_posterior_draws", "reference_posterior_draws.character", "reference_posterior_draws.pdb_posterior", "reference_posterior_draws.pdb_reference_posterior_info" ] }, { "page": "assert_checked_reference_posterior_draws", "title": "Assert that all checks of the reference posterior draws are true", "topics": [ "assert_checked_reference_posterior_draws", "assert_checked_reference_posterior_draws.pdb_reference_posterior_draws", "assert_checked_reference_posterior_draws.pdb_reference_posterior_info", "assert_checked_summary_statistics_draws", "assert_checked_summary_statistics_draws.pdb_reference_posterior_draws", "assert_checked_summary_statistics_draws.pdb_reference_posterior_info", "assert_checked_summary_statistics_draws.pdb_reference_posterior_summary_statistic" ] }, { "page": "bibliography", "title": "Get the bibliography of a posterior database", "topics": [ "bibliography", "pdb_bibliography" ] }, { "page": "check_pdb", "title": "Check the content a posterior database", "topics": [ "check_pdb", "check_pdb_aliases", "check_pdb_all_data_have_posterior", "check_pdb_all_models_have_posterior", "check_pdb_all_reference_posteriors_have_posterior", "check_pdb_posterior_references", "check_pdb_posterior_run_stan", "check_pdb_read_data", "check_pdb_read_model_code", "check_pdb_read_reference_posterior_draws", "check_pdb_references" ] }, { "page": "check_pdb_posterior", "title": "Test a posterior", "topics": [ "check_pdb_posterior" ] }, { "page": "check_reference_posterior_draws", "title": "Check that reference posterior draws follows the reference posterior draws definition.", "topics": [ "check_reference_posterior_draws", "check_reference_posterior_draws.character", "check_reference_posterior_draws.pdb_posterior", "check_reference_posterior_draws.pdb_reference_posterior_draws" ] }, { "page": "check_summary_statistics_draws", "title": "Check that reference posterior draws follows the reference posterior summary definition.", "topics": [ "check_summary_statistics_draws", "check_summary_statistics_draws.character", "check_summary_statistics_draws.pdb_posterior", "check_summary_statistics_draws.pdb_reference_posterior_draws" ] }, { "page": "compute_reference_posterior_draws", "title": "Compute a Reference Posteriors for a reference posterior info object", "topics": [ "compute_reference_posterior_draws" ] }, { "page": "compute_reference_posterior_draws_stan_sampling", "title": "Compute a Reference Posteriors using Rstan", "topics": [ "compute_reference_posterior_draws_stan_sampling" ] }, { "page": "compute_reference_posterior_summary_statistic", "title": "Compute Summary statistics from a reference posterior", "topics": [ "compute_reference_posterior_summary_statistic", "compute_summary_statistic" ] }, { "page": "data_file_path", "title": "Extract data for posterior", "topics": [ "data_file_path", "stan_data", "stan_data_file_path" ] }, { "page": "model_info", "title": "Access data and model information", "topics": [ "as.data_info", "as.data_info.list", "as.model_info", "as.model_info.list", "as.pdb_data_info", "as.pdb_model_info", "data_info", "data_info.character", "data_info.pdb_posterior", "model_info", "model_info.character", "model_info.pdb_posterior", "pdb_data_info", "pdb_model_info" ] }, { "page": "data_names", "title": "Get all existing data names from a posterior database", "topics": [ "data_names", "data_names.pdb_github", "data_names.pdb_local", "model_names.pdb_github", "reference_posterior_names.pdb_github" ] }, { "page": "filter_posteriors", "title": "Filter Posteriors in Database", "topics": [ "filter_posteriors" ] }, { "page": "framework", "title": "Identify the framework for a given [model_code]", "topics": [ "framework", "framework.pdb_model_code", "framework<-", "framework<-.character", "framework<-.pdb_model_code" ] }, { "page": "get_data", "title": "Posterior Data Sets", "topics": [ "as.pdb_data", "as.pdb_data.list", "get_data", "get_data.character", "get_data.pdb_data_info", "get_data.pdb_posterior", "pdb_data" ] }, { "page": "github_pat", "title": "Retrieve Github personal access token.", "topics": [ "github_pat" ] }, { "page": "handle_aliases", "title": "Return the name that the alias points to", "topics": [ "handle_aliases" ] }, { "page": "info", "title": "Extract information from a pdb object", "topics": [ "info" ] }, { "page": "info-set", "title": "Set information to a pdb object", "topics": [ "info<-" ] }, { "page": "model_code", "title": "Extract and construct model code objects", "topics": [ "as.model_code", "as.model_code.character", "as.model_code.stanmodel", "as.pdb_model_code", "as.stan_code", "model_code", "model_code.character", "model_code.pdb_model_info", "model_code.pdb_posterior", "model_code_file_path", "model_code_file_path.character", "model_code_file_path.pdb_model_info", "model_code_file_path.pdb_posterior", "pdb_model_code", "pdb_stan_code", "stan_code", "stan_code_file_path" ] }, { "page": "model_names", "title": "Get all existing model names from a posterior database", "topics": [ "model_names", "model_names.pdb_local" ] }, { "page": "pdb_aliases", "title": "Extract aliases list from posterior database", "topics": [ "pdb_aliases" ] }, { "page": "pdb_assert_file_exist", "title": "Assert that a file exists", "topics": [ "pdb_assert_file_exist", "pdb_assert_file_exist.pdb_local" ] }, { "page": "pdb_cache_path", "title": "Returns a writable cache path for a pdb and a path It will create the directory if it does not exist.", "topics": [ "pdb_cache_path" ] }, { "page": "pdb_cache_rm", "title": "Remove object from cache", "topics": [ "pdb_cache_rm", "pdb_cache_rm.pdb_data", "pdb_cache_rm.pdb_reference_posterior_draws" ] }, { "page": "pdb_cached_local_file_path", "title": "Read json file from 'path'", "topics": [ "pdb_cached_local_file_path" ] }, { "page": "pdb_compare_stan_models", "title": "Compare two stan models for the same data", "topics": [ "pdb_compare_stan_models" ] }, { "page": "pdb_file_copy", "title": "Copy a file from a pdb to a local path", "topics": [ "pdb_file_copy", "pdb_file_copy.pdb_github", "pdb_file_copy.pdb_local" ] }, { "page": "pdb_local", "title": "Create a Posterior Database (pdb) connection", "topics": [ "pdb", "pdb.character", "pdb.default", "pdb.pdb_model_code", "pdb_config", "pdb_default", "pdb_github", "pdb_local" ] }, { "page": "pdb_stan_sampling_versions", "title": "Extract relevant stan versions", "topics": [ "pdb_stan_sampling_versions" ] }, { "page": "pdb_version", "title": "Get version of the 'pdb'", "topics": [ "pdb_version", "pdb_version.pdb_github", "pdb_version.pdb_local" ] }, { "page": "pdb-set", "title": "Set pdb slot", "topics": [ "pdb<-" ] }, { "page": "posterior", "title": "Access a posterior in the posterior database", "topics": [ "as.pdb_posterior", "as.posterior", "as.posterior.list", "pdb_posterior", "posterior", "posterior.character" ] }, { "page": "posterior_dimension_names", "title": "Construct dimension names from a posterior dimension list", "topics": [ "posterior_dimension_names" ] }, { "page": "posterior_names", "title": "Get all existing posterior names from a posterior database or posterior objects.", "topics": [ "posterior_name", "posterior_names" ] }, { "page": "posteriors_tbl_df", "title": "Create Posterior Database tibbles", "topics": [ "posteriors_tbl_df" ] }, { "page": "read_json_from_pdb", "title": "Read JSON objects from the posterior database", "topics": [ "read_json_from_pdb" ] }, { "page": "reference_posterior_draws_file_path", "title": "Extract data for posterior", "topics": [ "reference_posterior_draws_file_path", "reference_posterior_draws_file_path.character", "reference_posterior_draws_file_path.pdb_posterior", "reference_posterior_draws_file_path.pdb_reference_posterior_info" ] }, { "page": "reference_posterior_info", "title": "Reference posterior information", "topics": [ "as.pdb_reference_posterior_info", "as.reference_posterior_info", "as.reference_posterior_info.list", "pdb_reference_posterior_draws_info", "pdb_reference_posterior_info", "reference_posterior_draws_info", "reference_posterior_info", "reference_posterior_info.character", "reference_posterior_info.pdb_posterior" ] }, { "page": "reference_posterior_names", "title": "Get all existing reference posterior names from a posterior database", "topics": [ "reference_posterior_names", "reference_posterior_names.pdb_local" ] }, { "page": "reference_posterior_summary_statistic", "title": "Reference posterior summary statistics", "topics": [ "pdb_reference_posterior_summary_statistic", "pdb_reference_posterior_summary_statistics", "reference_posterior_summary_statistic", "reference_posterior_summary_statistic.character", "reference_posterior_summary_statistic.list", "reference_posterior_summary_statistic.pdb_posterior", "reference_posterior_summary_statistic.pdb_reference_posterior_info", "reference_posterior_summary_statistics", "reference_posterior_summary_statistics.character", "reference_posterior_summary_statistics.pdb_posterior" ] }, { "page": "remove_pdb", "title": "Remove objects from local pdb", "topics": [ "remove_pdb", "remove_pdb.character", "remove_pdb.pdb_data", "remove_pdb.pdb_data_info", "remove_pdb.pdb_model_code", "remove_pdb.pdb_model_info", "remove_pdb.pdb_posterior", "remove_pdb.pdb_reference_posterior_draws", "remove_pdb.pdb_reference_posterior_info", "remove_pdb.pdb_reference_posterior_summary_statistic" ] }, { "page": "rename_pdb", "title": "Rename a pdb object", "topics": [ "rename_pdb", "rename_pdb.pdb_data", "rename_pdb.pdb_posterior" ] }, { "page": "run_stan", "title": "Run Stan on a posterior", "topics": [ "run_stan", "run_stan.pdb_posterior" ] }, { "page": "subset.pdb_reference_posterior_draws", "title": "Subset a [pdb_reference_posterior_draws] object", "topics": [ "subset.pdb_reference_posterior_draws" ] }, { "page": "summary_statistic_type", "title": "Extract the type of summary statistic", "topics": [ "summary_statistic_type" ] }, { "page": "thin_draws.pdb_reference_posterior_draws", "title": "Thin draws to reduce their size and autocorrelation of the chains.", "topics": [ "thin_draws.pdb_reference_posterior_draws" ] }, { "page": "write_pdb", "title": "Write objects to pdb", "topics": [ "write_pdb", "write_pdb.pdb_data", "write_pdb.pdb_data_info", "write_pdb.pdb_model_code", "write_pdb.pdb_model_info", "write_pdb.pdb_posterior", "write_pdb.pdb_reference_posterior_draws", "write_pdb.pdb_reference_posterior_info", "write_pdb.pdb_reference_posterior_summary_statistic", "write_pdb.stanmodel" ] } ], "_readme": "https://github.com/stan-dev/posteriordb-r/raw/HEAD/README.md", "_rundeps": [ "askpass", "backports", "checkmate", "cli", "curl", "gitcreds", "glue", "httr2", "ini", "jsonlite", "lifecycle", "magrittr", "openssl", "R6", "rappdirs", "rlang", "sys", "vctrs", "withr" ], "_score": 5.269162565431745, "_indexed": true, "_nocasepkg": "posteriordb", "_universes": [ "stan-dev" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.3.6", "date": "2026-07-11T06:12:30.000Z", "distro": "resolute", "commit": "ad0922f46fd641d82f21930bca6013bb2e67a5c6", "fileid": "https://r2.ropensci.org/4c744c9c85289968eaa1d530f48c03510d50b9b0195439744de220413ac6be13", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/stan-dev/actions/runs/29142266474" }, { "r": "4.6.1", "os": "linux", "version": "0.3.6", "date": "2026-07-11T06:12:26.000Z", "distro": "resolute", "commit": "ad0922f46fd641d82f21930bca6013bb2e67a5c6", "fileid": "https://r2.ropensci.org/8ee45bd4cf7f147dac171e17db713cc6f66289c575d6fe3d04eddacc0eb5e686", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/stan-dev/actions/runs/29142266474" }, { "r": "4.5.3", "os": "mac", "version": "0.3.6", "date": "2026-07-11T06:11:17.000Z", "commit": "ad0922f46fd641d82f21930bca6013bb2e67a5c6", "fileid": "https://r2.ropensci.org/f4dd8524d92e3d6ac76b97cb6c57463e32668566c1c029a4b5bb31a6a1857522", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/stan-dev/actions/runs/29142266474" }, { "r": "4.6.1", "os": "mac", "version": "0.3.6", "date": "2026-07-11T06:11:12.000Z", "commit": "ad0922f46fd641d82f21930bca6013bb2e67a5c6", "fileid": "https://r2.ropensci.org/0df78ad3ce2a2f521d708f9bcd72c56c4b4f50e60969be84e7deeece0a77f866", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/stan-dev/actions/runs/29142266474" }, { "r": "4.6.0", "os": "wasm", "version": "0.3.6", "date": "2026-07-11T06:12:26.000Z", "commit": "ad0922f46fd641d82f21930bca6013bb2e67a5c6", "fileid": "https://r2.ropensci.org/4491b826b7258af49d44777152bc439d7c02c2aae82215d1ed2591aefeb48e86", "status": "success", "buildurl": "https://github.com/r-universe/stan-dev/actions/runs/29142266474" } ] }